In our daily work we use Nextflow a lot to analyze our huge datasets derived from clinical trials or from our research in Genetics. As part of nf-gwas, we asked ourselves how to test production ready Nextflow pipelines in an efficient and automated way.

When it comes to testing, nf-core ...

On March 16th, Austria went into a strict lockdown due to COVID-19. Only two days later, on March 18th, we got a call from Florian Kronenberg, head of the Institute of Genetic Epidemiology: A team of experts from the Department of Internal Medicine are planning a COVID-related, multicentric study and are wondering if we can design a electronic questionnaire (eCRF) from scratch and set up a cloud-based system for data collection. Time was th...